Insertion junction: CLIP2.040738_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040738
Chromosome:chromosome 3
Location:4165680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800327 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCCCTGTCATACCGTAGCGAGGGCCCAACGCACACACGCCCACGCG
Internal bar code:GGACGAGGGGCGCGCCCGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2959
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGGGCAACGCATAATG
Suggested primer 2:TTCTGGATGCTTCCCGACAC