Insertion junction: CLIP2.040761_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040761
Chromosome:chromosome 2
Location:5833657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117250 (1 of 5) 3.2.1.23 - Beta-galactosidase / Lactase 3'UTR
Cre02.g800244 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCATGGCCAGTCATTAAATGGTCGGGATGGCATCCCATTGCGAGATG
Internal bar code:GGTCCTGCGCAGGGACCTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2291
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCGATGTGCTATGTGC
Suggested primer 2:AGAGACCTTCGCAGGGAGAT