Insertion junction: CLIP2.040774_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040774
Chromosome:chromosome 9
Location:2143638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395750 (1 of 6) 3.6.3.43 - Peptide-transporting ATPase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACGTGAGTCCAGAATCTCTGTATGAGCTTGAAGGGTGGGAAACGGGT
Internal bar code:TGTTTCGGGGAGAACCAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1379
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCCAGCATCAACACCT
Suggested primer 2:TGACTGACCTTCCTTCGTGC