Insertion junction: CLIP2.040776_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040776
Chromosome:chromosome 16
Location:885621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648100 (1 of 1) K05757 - actin related protein 2/3 complex, subunit 1A/1B (ARPC1A_B) 3'UTR
Cre16.g801886 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGTGCGGTATTGCGATCACACTCGATCACGCAAAGGCGCGCGACCA
Internal bar code:GCTTCTATAGGCGAGAAACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3028
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGAACAGGAGTGTGATGA
Suggested primer 2:CTGCGTTGCATGAACACCAA