Insertion junction: CLIP2.040781_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040781
Chromosome:chromosome 3
Location:3990967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171550 SSA13 cilia-sensing, structure and/or assembly; (1 of 1) PTHR21706//PTHR21706:SF15 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 65 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGCGTATGAGTGCCGCATCAACGCAAGGCTCGGCACGGCTGGGGCC
Internal bar code:TCGGATTTCTTTGTAGTGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3401
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCTTTTGCCAACTCCG
Suggested primer 2:ACGTGCCTACCATGATTGCA