Insertion junction: CLIP2.040788_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040788
Chromosome:chromosome 2
Location:2002718
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088350 SNR3 (1 of 6) PF09335 - SNARE associated Golgi protein (SNARE_assoc); SNARE associated Golgi protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGTGTGCGTGCGTTGTTGATCCTGGCTCGCCCCGCTCCGCCCCACC
Internal bar code:GATAAGCTTCACGTCAGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1230
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGCGAACAGGCCATTTC
Suggested primer 2:TTCACGGTGGAGAACTTCGG