Insertion junction: CLIP2.040800_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040800
Chromosome:chromosome 3
Location:5274518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182400 (1 of 7) K18932 - palmitoyltransferase (ZDHHC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTACATGAGTCGGGGTTATGAATGCGACATATGGGTCTCAGTTAAGTC
Internal bar code:GATTCTGAAGTTTTCAGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1951
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGATCGCAATGCACATG
Suggested primer 2:CTAATGACCACACCCCCACC