Insertion junction: CLIP2.040803_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040803
Chromosome:chromosome 2
Location:7185174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390578 TRP23,FAP11 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL; Flagellar Associated Protein 11 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTGCAGACATTCATCGCGGTTACAATATCACAATATTGCTGTCGCCC
Internal bar code:TAGAATTGGACCGGTTTGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAACAATGACACTGCGGC
Suggested primer 2:TGAAGTGCTCATTGACGGCT