Insertion junction: CLIP2.040816_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040816
Chromosome:chromosome 11
Location:2300961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095139 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGGATGAGGTTGCCCAGGAACGCGGCCTCCAGGTGCGGCGGGATGTG
Internal bar code:AGCATTGCGTATGAAAAATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGAAGTGCCGACGT
Suggested primer 2:GCCCTTTGCTCCACACATTG