Insertion junction: CLIP2.040820_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040820
Chromosome:chromosome 13
Location:4288448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592300 (1 of 1) 1.3.1.91 - tRNA-dihydrouridine(20) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGGTATCGCCGGGTAGCATGTTTGTCACCGTGCGCACCTCCGCAAT
Internal bar code:TGCCCTCCGGATTTTTATCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5270
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATAAGCAAAGCGTGTCG
Suggested primer 2:TAGGCGTTACAGTTGCAGCA