Insertion junction: CLIP2.040822_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040822
Chromosome:chromosome 7
Location:1862730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325738 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACCAAGACGACCGAAGGTGCGCTGCGGCCGGGGTCACGTTGGTCGGG
Internal bar code:AGTAAATTTCGTGGGATACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2567
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCACACCGTACACGTTC
Suggested primer 2:TTCTAACCGACCGACTTGCC