Insertion junction: CLIP2.040823_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040823
Chromosome:chromosome 10
Location:5233997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456150 HLD3 (1 of 1) PTHR10992:SF701 - SERINE HYDROLASE-RELATED; Haloalkane dehalogenase-like hydrolase CDS/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACGCGCTGCGCGCTCCCGCAGTGCCCCTGGCGGCGGTGGCGCTCGCC
Internal bar code:ACTAGACTCGGTGCCCTTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCATTGTTGTGTGGGTGC
Suggested primer 2:AAGCAAAGCAGCAACAGAGC