Insertion junction: CLIP2.040828_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040828
Chromosome:chromosome 2
Location:2851801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094700 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTTTAGGTTGGTAGCTGTAGAGCCCGCACAGCCGATTGGACCGCCCG
Internal bar code:TCATACCCGAAAGCAAGTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2343
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTGCACCATGATGATC
Suggested primer 2:TGTACTGTACACACACGCCC