Insertion junction: CLIP2.040828_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040828
Chromosome:chromosome 3
Location:1075821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTTGACAATGTTTGCAAGTGTTGGGCTGGCATCGTCTGGTTGTCTTC
Internal bar code:GGAGTCCACGTCTGTTCGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3174
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCATGCACCCGGTAATG
Suggested primer 2:GCGTGTTTTGAGTGCGTCTT