Insertion junction: CLIP2.040828_6

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040828
Chromosome:chromosome 12
Location:2635512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505800 MSC6,MSCL2,CAM16 (1 of 2) IPR002048//IPR006685//IPR010920 - EF-hand domain // Mechanosensitive ion channel MscS // LSM domain; Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGGATGAGGAATTCCGCATAATCCTTGGCCGCATGTCCCACACGC
Internal bar code:TACTCGGCGGAGGATGTTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AACATCTTTGCAAACCCGCC
Suggested primer 2:GTCAACCCTCTCCTGTGGTG