Insertion junction: CLIP2.040831_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040831
Chromosome:chromosome 10
Location:1259822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801114 (1 of 2) IPR003072//IPR003882 - Orphan nuclear receptor, NOR1 type // Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGGCTGCTTCGGTGGTGGCTGCGGATACTCGGGTCCCGGAAACCAGG
Internal bar code:GCGGTACCGACACCTAGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:872
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAGGGCTGCTCAGACAG
Suggested primer 2:GTACACAACACGCACCACAC