Insertion junction: CLIP2.040834_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040834
Chromosome:chromosome 15
Location:1150308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639200 (1 of 8) 2.4.1.5 - Dextransucrase / Sucrose 6-glucosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTGATTGCTTCGTGTGTTTTCTGTTGGTTGAGGAGATGCTGACATGG
Internal bar code:GCCGGATGTAGCATGAATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:916
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGAAATTGCAGCTAGCC
Suggested primer 2:CGTTTTCACGGTCTGCGTTT