Insertion junction: CLIP2.040837_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040837
Chromosome:chromosome 2
Location:818063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078700 (1 of 1) PTHR10694//PTHR10694:SF7 - JUMONJI DOMAIN CONTAINING PROTEIN // LYSINE-SPECIFIC DEMETHYLASE 4A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCATCCCATTAGATATGCATCAAAGGCATACACACGCGGCCGTGCATT
Internal bar code:TCATCCTGTTGCGTCGATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:989
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTATGACGGAGGTGGA
Suggested primer 2:TCCAAGCAGCGAGGCAATTA