Insertion junction: CLIP2.040840_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040840
Chromosome:chromosome 3
Location:7985241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGAGATTTTGGGCCCCGGAGATGGCTCAGGCGGCGCTAAGGACACG
Internal bar code:CCCTGCGGATGCATCCCGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:240
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGGTCCATCTCAGTGGG
Suggested primer 2:TCACGTTACTGGCAAGCGAT