Insertion junction: CLIP2.040848_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040848
Chromosome:chromosome 1
Location:5888990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041950 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATCGTGCAGGCGCGGAGTGGCCTGGGTTGTTGCAACGGCCCCTTCCC
Internal bar code:GAGACTGTTCGCCGTTGAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGGGACAACACGGTAT
Suggested primer 2:GATGATGCTAGGACAGGGGC