Insertion junction: CLIP2.040873_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040873
Chromosome:chromosome 16
Location:7492366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682026 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGGACCGCTCCTTGTCGCTTGAGTCGTGGAACCGGCAGATGCGGAGT
Internal bar code:TAGTCGGTTCCAGACGAATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:854
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCATCCTCATCAGCCGTC
Suggested primer 2:AGAAGGTGAAGCTGCTGCAA