Insertion junction: CLIP2.040874_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040874
Chromosome:chromosome 11
Location:629569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGCTCTTCCCGCTCCCCCCTCCTCTGTCTTTTGCATGGACGGCTAC
Internal bar code:GGGTATGCTGGTGTTAGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:32.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATCTTGGGGGTGTGTGG
Suggested primer 2:GGGGCTCCTCTTGAACTCAC