Insertion junction: CLIP2.040874_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040874
Chromosome:chromosome 11
Location:629570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGGCGGTGTCATCATGCCCCGTCACCCAGTTTCCCCAACCGCGCC
Internal bar code:CGGGACATGTAATTTATTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2047
LEAP-Seq percent confirming:63.9344
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCTCCTCTTGAACTCAC
Suggested primer 2:GAGATCTTGGGGGTGTGTGG