Insertion junction: CLIP2.040880_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040880
Chromosome:chromosome 14
Location:3114225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628450 CYN48,CYN1b,CYN1 Cyclophilin 48; (1 of 2) IPR002130//IPR029000 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain // Cyclophilin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATAAGGAACTCACAGAACTTGCAGGAGGGGCAGTTCCCCTTTTGCGC
Internal bar code:GTGTATTCCCATAGGTCTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3233
LEAP-Seq percent confirming:80.4878
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTTGCATTGCTGTGAA
Suggested primer 2:AACACCAGCCCTTAGTCAGC