Insertion junction: CLIP2.040882_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040882
Chromosome:chromosome 9
Location:2878006
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390678 (1 of 1) K17500 - integrin-linked kinase-associated serine/threonine phosphatase 2C [EC:3.1.3.16] (ILKAP) intron
Cre09.g801025 CDS
lncRNA_TCONS_00128634 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCGGCCAAGGAGGTGCGTGCGTGCGGGCGTGTGTTTGTGTTTGTGTG
Internal bar code:GGGGTCTACATATGTCTGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCACGACCATGAACGATT
Suggested primer 2:GCCTTGCCTTTGCTTTTCGA