Insertion junction: CLIP2.040889_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040889
Chromosome:chromosome 3
Location:4736373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177550 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAAAGAGGTAAGGGAGGTGTTGAGGTTTAGAGCATTCCCGGGCTGA
Internal bar code:ATTGCTCGAAACGGTTGTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1645
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCCATCAATCCCCCAT
Suggested primer 2:CGACAGTCGCGATGGTTAGA