Insertion junction: CLIP2.040889_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040889
Chromosome:chromosome 3
Location:4736385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177550 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCCCCCCTTGACACGCCACGCCTGCAGGGCAGCGCCGCGGTGGT
Internal bar code:ATTGCTCGAAACGGTTGTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAGTCGCGATGGTTAGA
Suggested primer 2:CTGTGCCATCAATCCCCCAT