Insertion junction: CLIP2.040892_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040892
Chromosome:chromosome 7
Location:809041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318209 (1 of 6) PTHR12197//PTHR12197:SF138 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGACAGGCACAGCTGGCGAGCGAGCAGCAGGCGGCATTGGCGAAGCG
Internal bar code:CGGATATTGGGTCACAGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6503
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGCTGTTGCTGCTCTG
Suggested primer 2:ATGCGCCTACTGGTTCACAA