Insertion junction: CLIP2.040896_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040896
Chromosome:chromosome 16
Location:595219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692200 MMP6 (1 of 1) IPR003609//IPR008752 - PAN/Apple domain // Peptidase M11, gametolysin; Metalloproteinase of VMP family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGAGCCTCAAGGTGCTGGTCATGGTGCTGTCGCTCACGGGCAGCTG
Internal bar code:ATACCAGTATACGTCGTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:12.9032
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGGAGAGGGAGTAAGGT
Suggested primer 2:TCCGTAAACAGGTGGCTCAC