Insertion junction: CLIP2.040899_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040899
Chromosome:chromosome 17
Location:2493810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715600 (1 of 1) PF11822 - Domain of unknown function (DUF3342) (DUF3342) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGTTCAAGCCAAACTTGCGCGGGGTGTGTCGCTGTCACACCTAAGAC
Internal bar code:GGTCGCACGAGTCTGGTCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCCAGCTTGTGACATGC
Suggested primer 2:GAACTTGCACAGCAACAGCA