Insertion junction: CLIP2.040900_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040900
Chromosome:chromosome 2
Location:4265829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104700 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCCGATGCTGCGAGGTCCAGCCCAAGCGTCGAAGGTGGGTTCTTAC
Internal bar code:CTTCACATGTGTCGGGGGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6855
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCAAAGGGTGTTGTGTC
Suggested primer 2:GTTTCGCGTCGTGTTTTCCA