Insertion junction: CLIP2.040900_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040900
Chromosome:chromosome 2
Location:4265831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g104700 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCACCGCAACCAGGCTTGATGGATCCCACGCATACTTGCTCGATGCC
Internal bar code:TGCAAGGACATATACCGTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1986
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCGCGTCGTGTTTTCCA
Suggested primer 2:GTCGCAAAGGGTGTTGTGTC