Insertion junction: CLIP2.040904_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040904
Chromosome:chromosome 17
Location:4660263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732566 (1 of 31) IPR016187 - C-type lectin fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCACCCTTTATGGCACTGCCCCGCCCTATCTTCACTTGCGGTGCCAG
Internal bar code:TTATCAACGTGCGGTTATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:465
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGAGAGGGAGGTGCAG
Suggested primer 2:AAGTTCTGCGAGTGGAAGGG