Insertion junction: CLIP2.040908_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040908
Chromosome:chromosome 2
Location:1427273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083450 (1 of 1) IPR000104//IPR002938 - Antifreeze protein, type I // FAD-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGATGCGGCAGTGCTGGGCGCGTGCGTGCGGAAGCACGGCCTGGGG
Internal bar code:CGTGGTCCAGAGGGTGATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4895
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTTCCAGCACCCTCAG
Suggested primer 2:TCTGCGTCTCTGTGTGTGTC