Insertion junction: CLIP2.040908_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040908
Chromosome:chromosome 2
Location:1427273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083450 (1 of 1) IPR000104//IPR002938 - Antifreeze protein, type I // FAD-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTAGGTTTGCGCCCTGGCCATCGGTGGGGCCGGAGTGCGCGGCGTCG
Internal bar code:GCCGTTGAATACTACTCACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:303
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCGTCTCTGTGTGTGTC
Suggested primer 2:CTCACTTCCAGCACCCTCAG