Insertion junction: CLIP2.040912_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040912
Chromosome:chromosome 6
Location:2591479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269865 SMM18 (1 of 1) IPR000104//IPR029044 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferases; S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACACACACACACACACACACCGCCCCGCACAGGCCCGC
Internal bar code:AAAGCTTTGGCACGCTGCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1645
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATGCTCCTCCTGCTTCC
Suggested primer 2:ACTTAGTGGGCGGGATTTGG