Insertion junction: CLIP2.040915_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040915
Chromosome:chromosome 10
Location:867309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423600 (1 of 1) PTHR10891//PTHR10891:SF5//PTHR22847 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED // WD40 REPEAT PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGCCGCATGAGGGGAGTACCTAGCGTGTGCCGCCTCCGTCACACCA
Internal bar code:TTTTGAAGGAGACCCTCCGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5063
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGTGTGTGT
Suggested primer 2:CACGTTTGTGCAGGTGTGAG