Insertion junction: CLIP2.040918_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040918
Chromosome:chromosome 2
Location:1622893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085150 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATCGCCGTCATTATTGTTGTTGTTGTCATAGTTGCCTGACTGAACCT
Internal bar code:TCATCGAATCCTATCTCCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1306
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTGCACATATCGCCGCA
Suggested primer 2:CAGAGGAAGACCCAGATCGC