Insertion junction: CLIP2.040921_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040921
Chromosome:chromosome 10
Location:6215300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g463026 (1 of 1) IPR001202//IPR001752//IPR027417//IPR027640 - WW domain // Kinesin motor domain // P-loop containing nucleoside triphosphate hydrolase // Kinesin-like protein; Large protein with small region (p-loop?) Similar to kinesin (peptide is unique) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCTAAAGCGGTCTGTCCCCTGCCCTCTCGCTTTACACTAAAGCCCCT
Internal bar code:CATTATTCGCACGTGTGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:148
LEAP-Seq percent confirming:17.6471
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGACGGGCTTGTGATAA
Suggested primer 2:AGGTGTGTGTGTGTGTGTGT