Insertion junction: CLIP2.040924_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040924
Chromosome:chromosome 2
Location:6172538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g120001 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGAGTAGTCCGGGGCCCTGCTGCTGCCGGGAAGTCAGGCTGTGCAC
Internal bar code:CTTGTTGAGGGCTGTCGGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:318
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGAGGGAGAAGATGATGG
Suggested primer 2:TCCATCACTCCCGCTACTCA