Insertion junction: CLIP2.040930_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040930
Chromosome:chromosome 11
Location:506122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467596 (1 of 7) IPR011335 - Restriction endonuclease type II-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCATGAATGCAACCCCCACCCCACGCAGTACGCCGCCTCCGACCGCG
Internal bar code:CCTAGCGTGGGAATCTAAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1885
LEAP-Seq percent confirming:95.3846
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAAATGTACGGCAGTGT
Suggested primer 2:ATACGCGAGGTGGTAGAGGT