Insertion junction: CLIP2.040931_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040931
Chromosome:chromosome 17
Location:1722291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708400 SUB12 (1 of 1) 3.4.21.66 - Thermitase / Thermophilic Streptomyces serine protease; Subtilisin-like protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCAGCCACTGAGTTTCGCCCTGTCACCCTGCACGTAACCACTCTCAAC
Internal bar code:AGAAGTACTGGGTCCGTCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTAGACCCTGAACCAC
Suggested primer 2:AACCACCAAGCAGAGAAGCA