Insertion junction: CLIP2.040933_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040933
Chromosome:chromosome 6
Location:2751823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271150 FAP74,C1d-HC3 (1 of 6) PF14874 - Flagellar-associated PapD-like (PapD-like); Flagellar Associated Protein 74 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCCGATGGGGGTTGCGGGCATGCGCACGCGGTTGCTCGAGAGCACC
Internal bar code:TGGGATTTATAGGTCAACTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4905
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAACCCTCTGTCTCTGG
Suggested primer 2:TCAGCATCGTCATCATCCGG