Insertion junction: CLIP2.040934_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040934
Chromosome:chromosome 10
Location:6712630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGACCCCATCATTATGTTCAGCATCATGCCACGACCCGTTCTCATTC
Internal bar code:CGGGTAATGCGGGTCGCTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGAGTCGCACTGTGTC
Suggested primer 2:CCACGCTAGACCGTACGTAC