Insertion junction: CLIP2.040936_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040936
Chromosome:chromosome 8
Location:2075542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369200 (1 of 2) IPR000104//IPR000719//IPR002290//IPR011009 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGAAGGGTGGAAAGGGCGCCGCCTGGGGCAGCATGGACCCGTGGCC
Internal bar code:AATTCTGGTTCGATCTTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3731
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGGGAGTACATGGAGGA
Suggested primer 2:CAGACGCAAATGCACACACA