Insertion junction: CLIP2.040937_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040937
Chromosome:chromosome 11
Location:4100171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481104 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCCTTGGACCCACCCTCGCGCTTGACGCTGCCGCGGTCGATGATCTT
Internal bar code:CTTGAGGCTTGACAAACATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1762
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAATCTGAACACCACCCA
Suggested primer 2:ACTGACGCTCTCCAGATCCT