Insertion junction: CLIP2.040941_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040941
Chromosome:chromosome 1
Location:5237361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036700 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCTTTGCCCTCCGACCGTGCCCCTGCGCCCCCTTTGCTGCACTGGT
Internal bar code:ACGCCTTATATATCCTGTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6767
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCTCATACCGGTATGT
Suggested primer 2:GGCGCCAGTACAAAAAGCAA