Insertion junction: CLIP2.040942_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040942
Chromosome:chromosome 9
Location:3421232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395769 FAP177 Flagellar Associated Protein 177 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGTCAAGGTCGTGCGTGGCCGCCTTCAAGCGGCAGCGTTTACTAGG
Internal bar code:GAGCCTGGTTATCACATTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2066
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGATGCAGCCAACGAGT
Suggested primer 2:ATGCGAGGCAAGGAAGGAAA