Insertion junction: CLIP2.040943_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040943
Chromosome:chromosome 6
Location:2937058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273300 TST1 (1 of 2) 6.1.1.3 - Threonine--tRNA ligase / Threonyl-tRNA synthetase; Threonyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTAGGCCTCTGCGCCTGGCTTCCTGTGGGCTCCTTCCCAAGCCGGCG
Internal bar code:TTAGCTATTTCTCTCGGCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTCATGGGGATTGGGAA
Suggested primer 2:GACAGCGGGTGGAAGAAGAA