Insertion junction: CLIP2.040945_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040945
Chromosome:chromosome 1
Location:6528180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g046237 GEX33 (1 of 1) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCAGTCCCTGGAACAGGAACTTGAGGTCCTCCAGGGTGAGGCGGCCG
Internal bar code:CAGCAACTACTTCAAAGAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:338
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGTGTGAAGGTCATGG
Suggested primer 2:TGTTGGGTTCACAGCTGTGT